BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E03LP1|AL430236
(926 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1134 1751 0.0
>3x_Contig1134
Length = 4452
Score = 1751 bits (874), Expect = 0.0
Identities = 907/927 (97%), Gaps = 1/927 (0%)
Strand = Plus / Minus
Query: 1 actgatgatccgtttgctgggtac-ggcgacgtaccgctgagcgctgctatgccggcagt 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3617 actgatgatccgtttgctgggtaccggcgacgtaccgctgagcgctgctatgccggcagt 3558
Query: 60 yaggttggttatagccagcaaaatggagccgagtgcctacccaggtcagcggtgcgttgc 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3557 caggttggttatagccagcaaaatggagccgagtgcctacccaggtcagcggtgcgttgc 3498
Query: 120 gcttggtcacgtgtgakatttygtgtgcyagcatcgwggctagctggctttcattgtygg 179
|||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||| ||
Sbjct: 3497 gcttggtcacgtgtgagatttcgtgtgccagcatcgaggctagctggctttcattgtcgg 3438
Query: 180 taacctgcagcagttatggwtytttgatyagcggcgcgctggcgcsntgctgccgcacgt 239
|||||||||||||| |||| | |||||| |||||||||||||||| |||||||||||
Sbjct: 3437 taacctgcagcagtaatggatctttgatcagcggcgcgctggcgcgtgcctgccgcacgt 3378
Query: 240 agaaatcgcccatagccagccgtgggccacaatcaaacgtttacyccagcttttcggcag 299
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3377 agaaatcgcccatagccagccgtgggccacaatcaaacgtttaccccagcttttcggcag 3318
Query: 300 ggtcttgattcttggctggatctgatgggaatwatgaatcagtaaatwactgcgattctg 359
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 3317 ggtcttgattcttggctggatctgatgggaataatgaatcagtaaataactgcgattctg 3258
Query: 360 aactaattcgaggattttatcaatattggtgtgatttccaatgtaacatcaattcatcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3257 aactaattcgaggattttatcaatattggtgtgatttccaatgtaacatcaattcatcta 3198
Query: 420 ttatyagtyagtgttctatccgctctggtggttattcaggttaagtaggttaacatataa 479
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3197 ttatcagtcagtgttctatccgctctggtggttattcaggttaagtaggttaacatataa 3138
Query: 480 acgtaacaacaaattaaaaagctggaaaatattactacttttccagctttcaatccatta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3137 acgtaacaacaaattaaaaagctggaaaatattactacttttccagctttcaatccatta 3078
Query: 540 atcgttaaatacaaaactttcttcagctagattgtggtcttttctataactctcgtccaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3077 atcgttaaatacaaaactttcttcagctagattgtggtcttttctataactctcgtccaa 3018
Query: 600 tattaaataatcatctggttgtttagagcttactcctttcaaccaaaactgttcaccgta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3017 tattaaataatcatctggttgtttagagcttactcctttcaaccaaaactgttcaccgta 2958
Query: 660 agctatcagcattgcccaatgatactcaagttcatggctacgaagacatactgccagata 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2957 agctatcagcattgcccaatgatactcaagttcatggctacgaagacatactgccagata 2898
Query: 720 actatcaatgggcttacatactaatgaagacgataaaaccattaattcagcctcatcttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2897 actatcaatgggcttacatactaatgaagacgataaaaccattaattcagcctcatcttc 2838
Query: 780 ttttttatttgcatacttaacgataattgctttaagcatttctacccaagtatggaaatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2837 ttttttatttgcatacttaacgataattgctttaagcatttctacccaagtatggaaatt 2778
Query: 840 aaaaacaactgtttcttcaggatcatcttcgtctttaaaaacaactccatcaacaatttt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2777 aaaaacaactgtttcttcaggatcatcttcgtctttaaaaacaactccatcaacaatttt 2718
Query: 900 atccttattaatcattatcgacaacct 926
|||||||||||||||||||||||||||
Sbjct: 2717 atccttattaatcattatcgacaacct 2691
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5911
Number of Sequences: 1807
Number of extensions: 5911
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)